Tell me good review paper for recent biological databases.
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Here are some good review papers on recent biological databases:
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The Importance of Biological Databases in Biological Discovery
- This paper provides an overview of major sequence databases and portals such as GenBank, UCSC Genome Browser, and Ensembl. It also covers model organism databases like WormBase and TAIR, as well as non-sequence-centric databases such as OMIM and KEGG .
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Databases of Biological Information
- This paper discusses the development of database tools for biologists, driven by the wealth of biological data generated by ongoing genome projects. It highlights the interpretation of this data from molecular interactions to interactions among organisms.
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Databases for Microbiologists
- This minireview surveys current databases of interest to microbiologists, including those that archive genes, genomes, expression data, protein sequences, metabolites, and pathways. It emphasizes the importance of these databases in microbiology.
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Biological Databases- Integration of Life Science Data
- This article presents information on popular bioinformatic databases available online, including sequence, phylogenetic, structure, pathway, and microarray databases. It highlights the explosive growth in biological information and the role of databases in managing this data.
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Biological Databases for Human Research
- This paper reviews human-related biological databases, classifying them into different categories according to their data types. It discusses the challenges in big data storage, processing, exchange, and curation as these databases continue to grow.
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The Molecular Biology Database Collection: an updated compilation of biological database resources
- This paper provides an updated listing of key databases valuable to the biological community. It aims to bring attention to high-quality databases and serves as a starting point for finding specialized databases useful in biological research.
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biochem4j: Integrated and extensible biochemical knowledge through graph databases
- This paper introduces biochem4j, a graph database that integrates chemical, reaction, enzyme, and taxonomic data from various reliable resources. It emphasizes the need for integrated repositories to catalogue biological entities and their relationships.
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Biological Database Searching
- This paper discusses the integral role of biological databases in molecular biology, particularly in the annotation and characterization of raw data from sequencing and other high-throughput experiments. It highlights the importance of these databases in archiving, managing, and disseminating biological data.
These papers collectively provide a comprehensive overview of the current landscape of biological databases, their development, and their applications in various fields of biological research.
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